STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DA2_0807Hypothetical protein. (233 aa)    
Predicted Functional Partners:
DA2_0806
Pyridine nucleotide-disulfide oxidoreductase family protein.
 
    0.983
DA2_0805
Rrf2 family protein.
  
    0.905
DA2_2049
Glycosyl transferase 8 family protein.
  
    0.738
DA2_2246
Pyridine nucleotide-disulfide oxidoreductase family protein.
  
    0.724
DA2_0290
Periplasmic [NiFe] hydrogenase small subunit.
   
   0.716
hysB
Periplasmic [NiFeSe] hydrogenase, small subunit.
   
   0.716
DA2_1962
Periplasmic [NiFe] hydrogenase small subunit.
   
   0.716
DA2_1165
Prepilin-type N-terminal cleavage/methylation domain protein.
  
     0.671
DA2_3216
Prophage tail fiber family protein.
  
     0.669
DA2_1522
Hypothetical protein.
  
     0.651
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.