STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_0902Putative sugar-binding domain protein. (320 aa)    
Predicted Functional Partners:
sdp6
Glycerol-3-phosphate dehydrogenase SDP6; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.887
dhaK
Dihydroxyacetone kinase, DhaK subunit.
  
  0.856
DA2_3013
Dihydroxyacetone kinase, L subunit.
 
  
  0.672
ptsP
Phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
  
 
 0.653
DA2_1279
FAD dependent oxidoreductase family protein.
    
 0.527
gpsA
NAD-dependent glycerol-3-phosphate dehydrogenase family protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.508
aqp3
Aquaporin-3; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.475
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.