STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_0974Tetratricopeptide repeat family protein. (874 aa)    
Predicted Functional Partners:
DA2_3731
Tetratricopeptide repeat family protein.
 
 0.886
DA2_2679
Hypothetical protein.
 
  
 0.801
DA2_1690
Response regulator.
 
 0.800
DA2_1520
Tetratricopeptide repeat family protein.
 
  
 0.790
DA2_1800
Hypothetical protein.
  
     0.765
DA2_3303
Tetratricopeptide repeat family protein.
 
 0.761
DA2_0062
Hypothetical protein.
 
     0.760
DA2_1290
Tetratricopeptide repeat family protein.
 
     0.760
flgA
Flagella basal body P-ring formation protein FlgA.
  
     0.754
fliJ
Flagellar export protein FliJ.
  
     0.747
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.