STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_1500Hypothetical protein. (154 aa)    
Predicted Functional Partners:
DA2_1499
H domain protein.
  
  
 0.897
DA2_3212
Tape measure domain protein.
  
  
 0.897
DA2_0202
Putative phage protein.
  
  
 0.771
DA2_1170
Type II secretory pathway component ExeA (Predicted ATPase)-like protein.
  
    0.728
DA2_1498
H protein.
  
  
 0.640
DA2_3219
Hypothetical protein.
  
  
0.601
DA2_0708
Tail protein, 43 kDa.
  
    0.524
DA2_0203
Hypothetical protein.
  
  
 0.499
DA2_1202
Phage Tail Collar domain protein.
  
  
 0.420
DA2_3802
Hypothetical protein.
  
  
 0.420
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.