STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_1900Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (408 aa)    
Predicted Functional Partners:
DA2_1899
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein.
 
 0.980
DA2_1902
Permease family protein.
 
  
 0.946
DA2_2497
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein.
 
 0.924
DA2_2798
Outer membrane efflux family protein.
 
 0.921
DA2_3870
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein.
 
 0.921
DA2_2500
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein.
 
 0.910
DA2_2688
Outer membrane efflux family protein.
  
 0.890
ttgC
Putative efflux pump outer membrane protein ttgC.
 
 0.886
DA2_1736
Type I secretion outer membrane, TolC family protein.
  
 0.861
DA2_1245
Efflux transporter, RND family, MFP subunit.
 
  
  0.827
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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