STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcrHHemerythrin-like DcrH domain protein. (960 aa)    
Predicted Functional Partners:
cheA
Chemotaxis histidine kinase.
 
 0.984
DA2_0518
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
 
 0.979
cheW
Chemotaxis signal transduction protein.
 
  0.974
DA2_2316
Response regulator.
 
 0.972
DA2_3084
Response regulator.
 
 0.969
DA2_0799
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
 
 0.965
DA2_3468
Response regulator.
 
 0.963
DA2_0863
cheW-like domain protein.
 
  0.957
DA2_3254
Response regulator.
  
 0.931
DA2_0865
cheR methyltransferase, all-alpha domain protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 0.928
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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