STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_2000Radical SAM superfamily protein. (517 aa)    
Predicted Functional Partners:
DA2_2001
ubiA prenyltransferase family protein; Belongs to the UbiA prenyltransferase family.
 
 
 0.921
DA2_1999
Methyltransferase domain protein.
 
 
 0.916
DA2_2003
Methyltransferase domain protein.
 
 
  0.670
DA2_2004
Hypothetical protein.
 
 
 0.602
DA2_2250
Glycosyl transferase 2 family protein.
 
     0.557
DA2_1838
Radical SAM superfamily protein.
  
     0.528
DA2_2002
Hypothetical protein.
    
  0.506
DA2_2836
Hypothetical protein.
  
     0.492
DA2_1998
Putative membrane protein.
       0.461
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
   
    0.423
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.