STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_2002Hypothetical protein. (143 aa)    
Predicted Functional Partners:
ribD
Riboflavin biosynthesis protein RibD.
    
 0.851
DA2_2003
Methyltransferase domain protein.
       0.774
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.764
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 0.752
DA2_2561
4Fe-4S binding domain protein.
    
  0.678
DA2_2781
4Fe-4S binding domain protein.
    
  0.678
aqp3
Aquaporin-3; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.672
DA2_2275
Phosphoglycolate phosphatase.
    
 0.569
phnX
Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
  
 0.543
DA2_1423
Alpha/beta hydrolase fold family protein.
  
 
 0.536
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.