STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_2005Cytidylyltransferase family protein. (241 aa)    
Predicted Functional Partners:
DA2_2007
Sialic acid synthase.
 
 
 0.932
DA2_2016
SAF domain protein.
 
 
 0.907
DA2_2102
Sialic acid synthase.
 
 
 0.895
DA2_2173
SAF domain protein.
 
 
 0.895
DA2_2006
Hypothetical protein.
 
   
 0.822
yrbI
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase.
 
  0.749
DA2_2015
Acetyltransferase family protein.
 
  
 0.700
DA2_2008
Short chain dehydrogenase family protein.
 
   0.682
DA2_2004
Hypothetical protein.
  
  
 0.622
DA2_2936
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.616
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.