STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DA2_2013Methyltransferase domain protein. (210 aa)    
Predicted Functional Partners:
DA2_2015
Acetyltransferase family protein.
 
    0.921
DA2_2016
SAF domain protein.
 
     0.836
DA2_2014
Cytidylyltransferase family protein.
 
     0.773
DA2_2011
Short chain dehydrogenase family protein.
 
     0.729
hisH
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.651
DA2_2012
Beta-eliminating lyase family protein; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.591
DA2_2437
GIY-YIG catalytic domain protein.
  
  
 0.587
DA2_3403
Tetrapyrrole (Corrin/Porphyrin) Methylases family protein.
  
  
 0.584
DA2_2018
Histidine biosynthesis family protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
       0.527
DA2_2007
Sialic acid synthase.
 
     0.465
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.