Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DA2_2170Beta-eliminating lyase family protein; Belongs to the DegT/DnrJ/EryC1 family. (397 aa)    
Predicted Functional Partners:
DA2_2171
CMP-N-acetylneuraminic acid synthetase.
 
  
 0.898
DA2_2172
Cytidylyltransferase family protein.
 
  
 0.860
DA2_2129
Lipopolysaccharides biosynthesis acetyltransferase domain protein.
  
 
 0.799
DA2_2101
marR family protein.
  
 
 0.686
DA2_2011
Short chain dehydrogenase family protein.
  
 
 0.661
DA2_2116
NAD dependent epimerase/dehydratase family protein.
  
 
 0.661
DA2_2015
Acetyltransferase family protein.
  
 
 0.629
DA2_1828
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein.
 
 
 0.613
DA2_2664
Sugar transferase, PEP-CTERM system associated family protein.
 
 
 0.609
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.566
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.