STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_2180hpcH/HpaI aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family. (259 aa)    
Predicted Functional Partners:
DA2_2181
NAD dependent epimerase/dehydratase family protein.
 
    0.798
DA2_3451
2-hydroxy-3-oxopropionate reductase.
 
 
 0.753
DA2_2736
NAD binding domain of 6-phosphogluconate dehydrogenase family protein.
 
 
 0.746
DA2_2240
NAD binding domain of 6-phosphogluconate dehydrogenase family protein.
 
 
 0.729
DA2_2294
D-galactarate dehydratase/altronate hydrolase family protein.
 
 
 0.725
DA2_2295
SAF domain protein.
 
 
 0.711
DA2_1755
Catalytic LigB subunit of aromatic ring-opening dioxygenase family protein.
  
  
 0.640
DA2_3448
Fumarylacetoacetate (FAA) hydrolase family protein.
  
  
 0.632
DA2_2010
Dihydrodipicolinate synthetase family protein; Belongs to the DapA family.
 
  
  0.570
DA2_2179
Hypothetical protein.
       0.569
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.