STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_2264Type I phosphodiesterase / nucleotide pyrophosphatase family protein. (524 aa)    
Predicted Functional Partners:
DA2_1804
Hypothetical protein.
  
     0.694
DA2_1395
Hypothetical protein.
  
     0.673
DA2_2263
uvrD/REP helicase family protein.
       0.660
DA2_1989
Xylose isomerase domain protein TIM barrel.
  
     0.638
DA2_1806
Hypothetical protein.
  
     0.624
DA2_1011
Hypothetical protein.
  
     0.610
DA2_1125
MATE efflux family protein.
 
     0.608
DA2_0393
Hypothetical protein.
  
     0.586
DA2_0144
Phosphoadenosine phosphosulfate reductase family protein.
 
     0.579
DA2_0258
DRTGG domain protein.
  
     0.567
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.