STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_2500Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein. (512 aa)    
Predicted Functional Partners:
bepE
Efflux pump membrane transporter BepE.
 0.992
DA2_2502
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.988
DA2_3872
RND transporter, hydrophobe/amphiphile efflux-1 family protein.
 0.964
acrA
acrA Membrane Fusion Protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.958
acrB
acrB RND-type permease.
 0.958
DA2_3871
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.953
DA2_1765
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.948
DA2_1245
Efflux transporter, RND family, MFP subunit.
 
 0.945
DA2_1900
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.910
DA2_2495
hlyD secretion family protein.
 
 0.893
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.