STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_2855Ribbon-helix-helix, copG family protein. (135 aa)    
Predicted Functional Partners:
DA2_2854
Hypothetical protein.
       0.773
DA2_1165
Prepilin-type N-terminal cleavage/methylation domain protein.
  
     0.747
DA2_2049
Glycosyl transferase 8 family protein.
  
     0.727
DA2_3216
Prophage tail fiber family protein.
 
     0.726
DA2_1522
Hypothetical protein.
  
     0.718
DA2_3212
Tape measure domain protein.
 
     0.707
DA2_2835
Glycosyl transferase, group 2 family protein.
 
     0.687
DA2_3175
Hypothetical protein.
  
     0.650
DA2_0885
EF hand family protein.
  
     0.649
DA2_3174
Hypothetical protein.
  
     0.616
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.