STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_3000Tat (twin-arginine translocation) pathway signal sequence domain protein. (665 aa)    
Predicted Functional Partners:
DA2_3254
Response regulator.
 
 0.981
DA2_1733
His Kinase A domain protein.
 
 0.951
DA2_2999
Response regulator.
 
 0.940
DA2_3001
Universal stress family protein.
 
 0.908
DA2_2901
Response regulator.
   
 0.907
DA2_2969
Response regulator.
 
 0.906
DA2_3513
Sensory box protein.
 
 
0.898
DA2_0988
Response regulator.
 
 0.891
DA2_1240
Response regulator.
 
 
0.890
DA2_2963
Sensory box protein.
 
 
0.890
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.