STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_3121Nucleoside recognition family protein. (323 aa)    
Predicted Functional Partners:
DA2_3073
Putative membrane protein.
  
     0.741
DA2_0321
Hypothetical protein.
  
     0.733
DA2_1093
Hypothetical protein.
  
    0.683
DA2_0953
Hypothetical protein.
  
     0.679
DA2_1805
Hypothetical protein.
  
     0.672
DA2_0369
Hypothetical protein.
  
     0.665
DA2_2035
Hypothetical protein.
  
     0.652
DA2_0905
Hypothetical protein.
  
     0.647
DA2_1386
Hypothetical protein.
  
     0.642
DA2_0975
Hypothetical protein.
  
     0.610
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.