STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_3232tadE-like family protein. (152 aa)    
Predicted Functional Partners:
DA2_3237
Response regulator.
  
  
 0.875
cpaB
Flp pilus assembly protein CpaB.
  
  
 0.875
DA2_3235
Bacterial type II secretion system F domain protein.
  
  
 0.861
DA2_3234
Bacterial type II secretion system F domain protein.
  
    0.770
DA2_3236
Type II/IV secretion system family protein.
  
  
 0.767
DA2_3239
Putative phospholipid-binding domain protein; Belongs to the bacterial secretin family.
  
  
 0.707
DA2_3231
Von Willebrand factor type A domain protein.
  
    0.691
DA2_3230
tadE-like family protein.
       0.634
DA2_3241
Type IV leader peptidase family protein.
  
  
 0.597
DA2_3242
flp/Fap pilin component family protein.
  
  
 0.595
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.