Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DA2_3239Putative phospholipid-binding domain protein; Belongs to the bacterial secretin family. (493 aa)    
Predicted Functional Partners:
cpaB
Flp pilus assembly protein CpaB.
 
 
 0.999
DA2_3236
Type II/IV secretion system family protein.
 
 0.998
DA2_3237
Response regulator.
 
 
 0.998
DA2_3234
Bacterial type II secretion system F domain protein.
 
 
 0.996
DA2_3235
Bacterial type II secretion system F domain protein.
 
 
 0.996
DA2_3241
Type IV leader peptidase family protein.
 
  
 0.987
DA2_3242
flp/Fap pilin component family protein.
 
  
 0.914
DA2_0530
Tetratricopeptide repeat family protein.
 
 0.898
DA2_3230
tadE-like family protein.
 
  
 0.884
DA2_3243
flp/Fap pilin component family protein.
 
  
 0.880
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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