STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
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[Homology]
Score
DA2_3285Putative ABC transporter, substrate-binding protein. (273 aa)    
Predicted Functional Partners:
DA2_3286
Binding--dependent transport system inner membrane component family protein.
 
  
 0.989
DA2_3287
recF/RecN/SMC N terminal domain protein.
 
  
 0.938
DA2_2643
DNA binding, excisionase family domain protein.
 
     0.815
DA2_2070
Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.810
DA2_3624
Aldehyde ferredoxin oxidoreductase, domains 2 & 3 family protein.
 
   
 0.763
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
    
 0.737
DA2_3126
Aldehyde ferredoxin oxidoreductase, N-terminal domain protein.
 
   
 0.617
DA2_1560
Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.609
DA2_2895
ABC transporter family protein.
    
 0.562
DA2_3127
4Fe-4S binding domain protein.
 
   
 0.532
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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