STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_3293ABC transporter family protein. (243 aa)    
Predicted Functional Partners:
DA2_3291
Amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein.
 
 0.997
DA2_3292
Bacterial extracellular solute-binding s, 3 family protein.
 0.990
DA2_2204
Amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein.
 0.972
DA2_3717
Amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein.
 0.968
DA2_0958
Amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein.
 0.967
DA2_1823
Amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein.
 0.967
DA2_3716
Amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein.
 0.967
DA2_3143
Amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein.
 0.964
DA2_1542
Amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein.
 0.963
DA2_3141
Binding--dependent transport system inner membrane component family protein.
 
 0.961
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.