STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_3496Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name. (287 aa)    
Predicted Functional Partners:
DA2_3495
Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name.
 
 0.994
DA2_3494
ABC transporter family protein; Belongs to the ABC transporter superfamily.
 
 
 0.991
potD
potD; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.979
DA2_3493
Bacterial extracellular solute-binding family protein.
 
 0.979
DA2_2253
potB.
 
 0.975
DA2_0825
Bacterial extracellular solute-binding family protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.958
DA2_0827
potB.
 
 0.954
potA
potA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.947
DA2_0828
ABC transporter family protein; Belongs to the ABC transporter superfamily.
 
 
 0.908
DA2_2209
ABC transporter family protein.
 
 
 0.800
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.