STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpQGlycerophosphoryl diester phosphodiesterase. (302 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.867
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 0.852
aqp3
Aquaporin-3; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.776
DA2_3592
Alkaline phosphatase family protein; Belongs to the alkaline phosphatase family.
  
 
 0.699
DA2_3202
Hypothetical protein.
    
   0.689
DA2_1304
Ethanolamine ammonia lyase large subunit family protein.
     
  0.682
DA2_1305
Ethanolamine ammonia-lyase light chain family protein; Belongs to the EutC family.
     
  0.682
sdp6
Glycerol-3-phosphate dehydrogenase SDP6; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 
 0.679
DA2_1279
FAD dependent oxidoreductase family protein.
 
 
 0.669
DA2_0774
nagD protein, putative.
 
  
  0.651
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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