STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_3548Hypothetical protein. (549 aa)    
Predicted Functional Partners:
DA2_3549
Hypothetical protein.
 
     0.950
DA2_3550
VTC domain protein.
 
     0.908
DA2_3152
Sensory box protein.
  
    0.679
DA2_2047
Putative ATPase.
  
     0.529
DA2_1418
Hypothetical protein.
  
     0.451
DA2_3553
Glycosyl transferases group 1 family protein.
 
     0.423
DA2_1337
Diaminopimelate epimerase-like protein.
  
     0.419
DA2_0067
ABC 3 transport family protein.
   
  
 0.418
DA2_3078
Hypothetical protein.
  
     0.418
DA2_1052
Putative membrane protein.
  
     0.413
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.