Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DA2_37524Fe-4S binding domain protein. (178 aa)    
Predicted Functional Partners:
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 0.984
DA2_3757
NADH ubiquinone oxidoreductase, 20 Kd subunit.
  
 0.943
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
  
 0.942
DA2_3754
Respiratory-chain NADH dehydrogenase, 49 Kd subunit.
  
 0.940
DA2_3756
4Fe-4S binding domain protein.
  
 0.931
DA2_3758
NADH dehydrogenase family protein.
  
 0.920
DA2_3759
NADH-Ubiquinone/plastoquinone (complex I), various chains family protein.
  
 0.910
DA2_2828
Pyridine nucleotide-disulfide oxidoreductase family protein.
   
 0.905
DA2_1915
Tat (twin-arginine translocation) pathway signal sequence domain protein.
 
  
  0.847
DA2_1770
NADH ubiquinone oxidoreductase, 20 Kd subunit; Belongs to the complex I 20 kDa subunit family.
  
 0.843
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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