STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_3786Holin. (109 aa)    
Predicted Functional Partners:
DA2_3785
Hypothetical protein.
       0.773
DA2_3787
Transglycosylase SLT domain protein.
  
    0.622
DA2_3791
Hypothetical protein.
       0.622
DA2_3788
Hypothetical protein.
       0.621
DA2_3790
Hypothetical protein.
       0.621
DA2_3792
Terminase-like family protein.
       0.611
DA2_3789
Hypothetical protein.
       0.586
DA2_3793
Hypothetical protein.
       0.550
DA2_3794
Hypothetical protein.
       0.550
DA2_3795
Hypothetical protein.
       0.550
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.