STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C15orf41Uncharacterized protein C15orf41. (283 aa)    
Predicted Functional Partners:
CDAN1
Codanin-1.
    
 
 0.906
ASF1A
Histone chaperone ASF1.
    
 
 0.796
C1orf146
Uncharacterized protein C1orf146.
  
 0.726
FAM98B
Protein FAM98B.
    
 
 0.719
PCBD2
Pterin-4-alpha-carbinolamine dehydratase 2.
      
 0.661
SNED1
Sushi, nidogen and EGF-like domain-containing protein 1.
    
 
 0.611
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.593
DONSON
Protein downstream neighbor of son.
    
   0.548
HIRA
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
   0.532
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
  
 0.475
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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