STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEPHL1-2Hephaestin-like protein 1. (67 aa)    
Predicted Functional Partners:
SLC40A1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.637
FAM20C
Extracellular serine/threonine protein kinase FAM20C.
    
  0.432
PROS1
Vitamin K-dependent protein S.
   
 0.423
ATP7B
Copper-transporting ATPase 2.
  
 
 0.416
ATP7A
Copper-transporting ATPase 1.
  
 
 0.416
VMA21
Vacuolar ATPase assembly integral membrane protein vma21.
    
 
 0.414
EDA2R
Tumor necrosis factor receptor superfamily member 27.
      
 0.410
LOC110478386
Transmembrane 4 L6 family member 1.
      
 0.408
CUNH11orf54
Ester hydrolase C11orf54.
      
 0.408
AASDH
Acyl-CoA synthetase family member 4.
     
 0.401
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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