Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
UBL3Ubiquitin-like protein. (150 aa)    
Predicted Functional Partners:
NEDD8
Ubiquitin-like protein Nedd8.
      
 0.579
SUMO1
Small ubiquitin-related modifier 1.
      
 0.566
UFM1
Ubiquitin-fold modifier 1.
      
 0.565
ENSLSDP00000000815
Small ubiquitin-related modifier 3-like.
      
 0.497
SUMO2
Small ubiquitin-related modifier.
      
 0.497
CLPX
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial.
      
 0.450
UBA5
Ubiquitin-like modifier-activating enzyme 5.
      
 0.430
NAE1
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.
      
 0.408
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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