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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACTINCactin. (769 aa)    
Predicted Functional Partners:
TIMM10
Mitochondrial import inner membrane translocase subunit Tim10.
   
 0.911
PRKRIP1
PRKR-interacting protein 1.
    
 0.910
DHX8
ATP-dependent RNA helicase DHX8.
    
 0.894
SDE2
Protein SDE2.
    
 0.856
CDC5L
Cell division cycle 5-like protein.
    
 
 0.845
CRNKL1
Crooked neck-like protein 1.
    
 
 0.839
CDC40
Pre-mRNA-processing factor 17.
    
 0.824
ENSLSDP00000008292
annotation not available
    
 0.821
SLU7
Pre-mRNA-splicing factor SLU7.
    
 0.821
TIMM10B
Mitochondrial import inner membrane translocase subunit Tim10 B.
   
 0.819
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.