STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL31Kelch-like protein 31. (634 aa)    
Predicted Functional Partners:
RHBDD1
Rhomboid-related protein 4.
      
 0.795
TMEM161A
Transmembrane protein 161A.
      
 0.717
TMEM38A
Trimeric intracellular cation channel type A.
   
  
 0.710
TMEM70
Transmembrane protein 70, mitochondrial.
      
 0.710
TMEM214
Transmembrane protein 214.
      
 0.698
CUL3
Cullin-3; Belongs to the cullin family.
    
 0.677
NTMT1
N-terminal Xaa-Pro-Lys N-methyltransferase 1.
      
 0.676
CSRP3
Cysteine and glycine-rich protein 3.
   
  
 0.656
LRIG2
Leucine rich repeats and immunoglobulin like domains 2.
     
 0.600
TDRD3
Tudor domain-containing protein 3.
      
 0.598
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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