Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BEND4BEN domain-containing protein 4. (325 aa)    
Predicted Functional Partners:
SLC30A9
Zinc transporter 9.
      
 0.873
TMEM33
Transmembrane protein 33.
      
 0.710
IL22RA1
Interleukin-22 receptor subunit alpha-1.
   
    0.651
SHISA3
Protein shisa-3.
      
 0.569
LRRC66
Leucine-rich repeat-containing protein 66.
      
 0.568
BEND7
BEN domain-containing protein 7.
      
 0.565
BEND3
BEN domain-containing protein 3.
      
 0.539
PDCL3
Phosducin-like protein 3.
      
 0.524
NFXL1
NF-X1-type zinc finger protein NFXL1.
      
 0.520
HTATSF1
HIV Tat-specific factor 1.
      
 0.516
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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