STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110467925Zona pellucida sperm-binding protein 2. (913 aa)    
Predicted Functional Partners:
ENSLSDP00000008350
annotation not available
   
 0.766
LOC110472685
Zona pellucida sperm-binding protein 3.
   
 0.766
GDF9
Growth/differentiation factor 9.
   
 0.646
SPAM1
Hyaluronidase.
    
 0.592
CHIA
Acidic mammalian chitinase; Belongs to the glycosyl hydrolase 18 family.
   
 0.583
LOC110476233
Pancreatic secretory granule membrane major glycoprotein GP2.
   
 
 0.546
TNNC2
Troponin C, skeletal muscle.
   
 
 0.528
BMP15
Bone morphogenetic protein 15.
   
 0.475
AMH
Muellerian-inhibiting factor.
    
 0.469
SHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.468
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.