Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SH2D3CSH2 domain-containing protein 3C. (714 aa)    
Predicted Functional Partners:
BCAR1
Breast cancer anti-estrogen resistance protein 1.
    
 0.784
NEDD9
Enhancer of filamentation 1.
    
 0.776
KCNE4
Potassium voltage-gated channel subfamily E member 4.
     
 0.624
TULP4
Tubby-related protein 4; Belongs to the TUB family.
     
 0.610
CASS4
Cas scaffolding protein family member 4.
    
 0.545
KCNK10
Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.470
FIBCD1
Fibrinogen C domain-containing protein 1.
    
 0.464
SEC24A
Protein transport protein Sec24A.
    
 0.460
FNBP1L
Formin-binding protein 1-like.
    
 
 0.457
SLC35F2
Solute carrier family 35 member F2.
      
 0.439
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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