Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LIMK2LIM domain kinase 2. (642 aa)    
Predicted Functional Partners:
CFL2
Cofilin-2; Belongs to the actin-binding proteins ADF family.
   
 0.990
PAK2
Non-specific serine/threonine protein kinase.
    
0.961
LOC110480644
Serine/threonine-protein kinase PAK 1.
  
 
0.955
LOC110480121
Non-specific serine/threonine protein kinase.
    
0.952
PAK1
Non-specific serine/threonine protein kinase.
    
0.952
ROCK2
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
    
0.949
ROCK1
Rho-associated protein kinase 1.
    
0.949
PAK5
Non-specific serine/threonine protein kinase.
    
0.938
PAK4
Serine/threonine-protein kinase PAK 4.
    
0.937
PAK6
Non-specific serine/threonine protein kinase.
    
0.936
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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