STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOR2ATorsin. (351 aa)    
Predicted Functional Partners:
GHRH
VIP peptide.
      
 0.851
LOC110478952
Torsin-1A-interacting protein 2.
    
 
 0.731
TOR1B
Torsin.
   
   0.726
TOR1A
Torsin.
   
   0.726
CCK
Cholecystokinin.
      
 0.713
SUN2
SUN domain-containing protein 2.
   
  
 0.673
PAM
Peptidyl-glycine alpha-amidating monooxygenase.
      
 0.586
SLC25A27
Mitochondrial uncoupling protein 4; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.568
RNF170
E3 ubiquitin-protein ligase RNF170.
      
 0.568
AP1S2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
      
 0.567
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.