STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110484605-2Heat shock protein, mitochondrial; Belongs to the GroES chaperonin family. (102 aa)    
Predicted Functional Partners:
HSPD1
Heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.
 
 
 0.999
HSPA9
Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.
  
 
 0.935
MDH2
Malate dehydrogenase.
   
 
 0.932
GRPEL1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.911
ETHE1
Persulfide dioxygenase ETHE1, mitochondrial.
    
 
 0.844
GRPEL2
GrpE 2, mitochondrial; Belongs to the GrpE family.
  
 
 0.841
CLPP
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
 0.830
CLPB
Caseinolytic peptidase B.
  
 
 0.807
NDUFA6
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed to be not involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
  
 0.788
HSPA4
Heat shock protein 4.
  
 
 0.773
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.