Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAMPeptidyl-glycine alpha-amidating monooxygenase. (997 aa)    
Predicted Functional Partners:
RASSF9
Ras association domain-containing protein 9.
    
 
 0.796
UHMK1
Serine/threonine-protein kinase Kist.
    
 
 0.656
RASSF10
Ras association domain family member 10.
    
 
 0.621
CYB561
Cytochrome b561.
      
 0.599
CPE
Carboxypeptidase E.
   
  
 0.592
TOR2A
Torsin.
      
 0.586
KALRN
Kalirin.
    
 
 0.584
GDNF
Glial cell line-derived neurotrophic factor.
      
 0.575
INS
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
      
 0.574
BET1
BET1.
      
 0.562
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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