STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRAMP1Protein cramped-like. (1334 aa)    
Predicted Functional Partners:
NR0B2
Nuclear receptor subfamily 0 group B member 2.
    
 
 0.593
ENSLSDP00000000912
annotation not available
      
 0.591
LOC110471478
GON-4-like protein.
   
 
 0.591
CRYM
Ketimine reductase mu-crystallin.
      
 0.571
JPT2
Hematological and neurological expressed 1-like protein.
      
 0.529
MTREX
Superkiller viralicidic activity 2-like 2.
      
 0.524
ANTKMT
Protein FAM173A.
      
 0.509
SDR42E2
Putative short-chain dehydrogenase/reductase family 42E member 2.
      
 0.467
TSR3
Probable ribosome biogenesis protein RLOC_00006116; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.463
NPAT
Protein NPAT.
    
 
 0.445
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.