Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC27A4Long-chain fatty acid transport protein 4. (643 aa)    
Predicted Functional Partners:
SLC27A6
Long-chain fatty acid transport protein 6.
  
  
 
0.907
SLC27A5
Very long-chain acyl-CoA synthetase.
  
  
 
0.904
PTPN6
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
      
 0.874
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
    
 0.730
BBS9
Protein PTHB1.
   
 0.699
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.693
BBS4
Bardet-Biedl syndrome 4 protein.
    
 0.686
ERI1
3'-5' exoribonuclease 1.
      
 0.684
NIPAL4
Magnesium transporter NIPA4.
    
 
 0.675
TTC8
Tetratricopeptide repeat protein 8.
    
 0.650
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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