Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TMEM45B_2Transmembrane protein 45B. (307 aa)    
Predicted Functional Partners:
GASK1B
Protein FAM198B.
      
 0.659
SLC39A6
Zinc transporter ZIP6.
   
  
 0.568
ATE1
Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.
      
 0.567
SLC4A9
Anion exchange protein.
      
 0.565
SPCS2
Signal peptidase complex subunit 2.
      
 0.564
GPR87
G protein-coupled receptor 87.
      
 0.549
TMEM171
Transmembrane protein 171.
      
 0.538
LRMP
Lymphoid-restricted membrane protein.
      
 0.508
DOCK7
Dedicator of cytokinesis protein 7; Belongs to the DOCK family.
      
 0.502
GPR160
Putative G-protein coupled receptor 160.
   
  
 0.461
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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