Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IFT140Intraflagellar transport protein 140. (1453 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport protein 122.
   
 0.999
WDR35
WD repeat-containing protein 35.
   
 0.998
WDR19
WD repeat-containing protein 19.
   
 0.998
TTC21B
Tetratricopeptide repeat protein 21B.
   
 0.997
IFT43
Intraflagellar transport protein 43.
    
 0.996
IFT172
Intraflagellar transport protein 172.
   
 0.979
IFT20
Intraflagellar transport protein 20.
   
 0.978
IFT52
Intraflagellar transport protein 52.
   
 0.968
IFT74
Intraflagellar transport protein 74.
   
 0.967
IFT81
Intraflagellar transport protein 81.
   
 0.958
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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