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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZRSR2U2 small nuclear ribonucleoprotein auxiliary factor subunit-related protein 2. (304 aa)    
Predicted Functional Partners:
U2AF2
Splicing factor U2AF subunit.
   
 0.976
SRSF2
Serine/arginine-rich splicing factor 2.
   
0.880
SRSF1
Serine/arginine-rich splicing factor 1.
   
 0.837
SNRNP35
U11/U12 small nuclear ribonucleoprotein.
   
 0.763
RNPC3
RNA-binding protein 40.
   
 
 0.754
POLR2K
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
     
 0.740
SNRNP48
U11/U12 small nuclear ribonucleoprotein.
   
 
 0.738
LOC110474841
Serine/arginine-rich splicing factor 7.
   
 0.686
SRSF7
Serine/arginine-rich splicing factor 7.
   
 0.686
SF3B1
Splicing factor 3B subunit 1.
   
 
 0.678
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.