STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA17Spermatogenesis-associated protein 17. (203 aa)    
Predicted Functional Partners:
SPATA7
Spermatogenesis-associated protein 7.
      
 0.692
SULT4A1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.675
LOC110468826
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.655
SPAG6
Sperm-associated antigen 6.
    
 
 0.639
CFAP65
Coiled-coil domain-containing protein 108.
   
  0.633
FAM228B
Protein FAM228B.
   
 
 0.616
CFAP99
Cilia-and flagella-associated protein 99.
   
 
 0.613
LRIG3
Leucine-rich repeats and immunoglobulin-like domains protein 3.
    
 
 0.607
DPY30
Protein dpy-30.
   
 
 0.601
SPATA20
Spermatogenesis-associated protein 20.
      
 0.600
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.