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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA17Spermatogenesis-associated protein 17. (203 aa)    
Predicted Functional Partners:
SPATA20
Spermatogenesis-associated protein 20.
      
 0.572
SPATA7
Spermatogenesis-associated protein 7.
      
 0.556
LOC110479574
Rab-like protein 2A.
   
 0.527
RAB11A
Ras-related protein Rab-11A.
   
 0.527
RAB11B
Ras-related protein Rab-11B.
   
 0.527
RAB25
Ras-related protein Rab-25.
   
 0.527
LOC110471567
Ras-related protein Rab-11A.
   
 0.527
KCTD3
BTB/POZ domain-containing protein KCTD3.
      
 0.525
MGAT1
Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.
      
 0.524
GPATCH2
G patch domain-containing protein 2.
      
 0.520
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.