STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAMPCathelicidin antimicrobial peptide. (160 aa)    
Predicted Functional Partners:
S100A12
Protein MRP-126.
   
 
 0.656
LOC110481437
Gallinacin-2.
   
  
 0.646
LOC110480956
N-acetylmuramoyl-L-alanine amidase.
   
  
 0.596
CXCR1
C-X-C chemokine receptor type 1; Belongs to the G-protein coupled receptor 1 family.
  
 
 0.588
H2-EB1
H-2 class II histocompatibility antigen, E-S beta chain.
   
   0.534
LOC110480961
Class II histocompatibility antigen, B-L beta chain.
   
   0.534
LOC110480017
Class II histocompatibility antigen, B-L beta chain.
   
   0.534
H2-AB1
H-2 class II histocompatibility antigen, A beta chain.
   
   0.534
ENSLSDP00000015121
Antimicrobial peptide THP1-like.
   
  
 0.524
ENSLSDP00000016468
annotation not available
   
  
 0.524
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.