Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYCE2Synaptonemal complex central element protein 2. (137 aa)    
Predicted Functional Partners:
SYCP1
Synaptonemal complex protein 1.
    
 0.976
SYCE3
Synaptonemal complex central element protein 3.
    
 0.970
SPO11
Meiotic recombination protein SPO11.
      
 0.873
SYCP3
Synaptonemal complex protein 3.
    
 0.795
SMC3
Structural maintenance of chromosomes protein.
     
 0.769
RNF212B
RING finger protein 212B.
      
 0.738
BMP15
Bone morphogenetic protein 15.
      
 0.706
HAUS8
HAUS augmin-like complex subunit 8.
      
 0.688
HSF2BP
Heat shock factor 2-binding protein.
      
 0.687
FANCB
Fanconi anemia group B protein.
      
 0.682
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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