STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001104annotation not available (193 aa)    
Predicted Functional Partners:
ARHGAP32
Rho GTPase-activating protein 32.
 
      0.899
CDC42
Cell division control protein 42.
   
 0.703
MLST8
Target of rapamycin complex subunit lst8.
    
 0.544
ITSN2
Intersectin-2.
    
 0.523
ITSN1
Intersectin-1.
    
 0.478
CDC42EP4
CDC42 effector protein 4.
     
 0.477
RICTOR
Rapamycin-insensitive companion of mTOR.
    
 0.474
RHOU
Rho-related GTP-binding protein RhoU.
   
 0.469
RHOV
Rho-related GTP-binding protein RhoV.
   
 0.469
MAPKAP1
Target of rapamycin complex 2 subunit MAPKAP1.
    
 0.461
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.