Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RLOC_00003837Uncharacterized protein C17orf104. (287 aa)    
Predicted Functional Partners:
SYCP3
Synaptonemal complex protein 3.
      
 0.561
ENSLSDP00000009517
annotation not available
    
 
 0.501
YTHDC2
Putative ATP-dependent RNA helicase YTHDC2.
    
 
 0.501
MEI1
Meiosis inhibitor protein 1.
      
 0.472
MEIOB
Meiosis-specific with OB domain-containing protein.
      
 0.457
MYSM1
Histone H2A deubiquitinase MYSM1.
      
 0.454
FAM171A1
Protein FAM171A1.
      
 0.429
FAM171A2
Protein FAM171A2.
      
 0.429
M1AP
Meiosis 1 arrest protein.
      
 0.422
RBM46
Putative RNA-binding protein 46.
      
 0.414
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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