Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ETV5ETS translocation variant 5. (486 aa)    
Predicted Functional Partners:
COP1
E3 ubiquitin-protein ligase RFWD2.
    
 
 0.926
STK40
Serine/threonine-protein kinase 40.
    
   0.922
DET1
DET1.
    
 
 0.854
ID4
DNA-binding protein inhibitor ID-4.
     
 0.734
ZBTB16
Zinc finger and BTB domain-containing protein 16.
      
 0.671
ETV1
ETS translocation variant 1.
   
   0.632
ENSLSDP00000016482
annotation not available
      
 0.590
SPRY1
Protein sprouty 1.
      
 0.565
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
      
 0.565
SOX9
Transcription factor SOX-9.
      
 0.548
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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