STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM204Transmembrane protein 204. (226 aa)    
Predicted Functional Partners:
KCNG3
Potassium voltage-gated channel subfamily G member 3; Belongs to the potassium channel family.
      
 0.567
KBTBD12
Kelch repeat and BTB domain-containing protein 12.
   
  
 0.557
ATR
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
      
 0.538
TNS3
Tensin-3.
   
  
 0.535
XPC
DNA repair protein complementing XP-C cells.
      
 0.527
RRP36
Ribosomal RNA processing protein 36.
      
 0.527
CFAP161
Uncharacterized protein C15orf26.
      
 0.495
FIBIN
Fin bud initiation factor.
  
   
 0.452
EIF3A
Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
      
 0.432
TRAPPC6B
Trafficking protein particle complex subunit 6B.
      
 0.419
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (26%) [HD]